CDS

Accession Number TCMCG007C52231
gbkey CDS
Protein Id XP_009141461.1
Location complement(join(3834707..3834934,3835031..3835072,3835176..3835202,3835323..3835487,3835570..3835639,3836519..3836706))
Gene LOC103865402
GeneID 103865402
Organism Brassica rapa

Protein

Length 239aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009143213.3
Definition protein TRANSPARENT TESTA 16 isoform X3 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description MADS-box transcription factor
KEGG_TC -
KEGG_Module M00532        [VIEW IN KEGG]
KEGG_Reaction R01221        [VIEW IN KEGG]
KEGG_rclass RC00022        [VIEW IN KEGG]
RC02834        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K02437        [VIEW IN KEGG]
ko:K09260        [VIEW IN KEGG]
EC -
KEGG_Pathway ko00260        [VIEW IN KEGG]
ko00630        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
ko04013        [VIEW IN KEGG]
ko04022        [VIEW IN KEGG]
ko04371        [VIEW IN KEGG]
ko05418        [VIEW IN KEGG]
map00260        [VIEW IN KEGG]
map00630        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
map04013        [VIEW IN KEGG]
map04022        [VIEW IN KEGG]
map04371        [VIEW IN KEGG]
map05418        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000271        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0005982        [VIEW IN EMBL-EBI]
GO:0006073        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008360        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009250        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0010942        [VIEW IN EMBL-EBI]
GO:0016051        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019252        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0022604        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0033692        [VIEW IN EMBL-EBI]
GO:0034637        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0035670        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043068        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043455        [VIEW IN EMBL-EBI]
GO:0043900        [VIEW IN EMBL-EBI]
GO:0044042        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044264        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048438        [VIEW IN EMBL-EBI]
GO:0048440        [VIEW IN EMBL-EBI]
GO:0048467        [VIEW IN EMBL-EBI]
GO:0048481        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051302        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080060        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080154        [VIEW IN EMBL-EBI]
GO:0080155        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1900376        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000029        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000762        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAAGGGGGAAGATCGAGATAAAGAAGATAGAGAATAAGACATCGAGGCAAGTGACCTTCTCCAAGAGAAGAAATGGTCTTATCAAGAAGACTCGTGAGCTCTCTGTTCTTTGTGATGCTCACATCGGTCTCATCGTCTTCTCCACCACCGGAAAGCTTACCCAGTACTGCTCCGAACACTCTAATATGCCTCAGCTCATTGACAGATATTTGACAAAAGAAGGATTGCAACTTCCTGACCTTAATGACGACCGGGATGACCTGCGCCATGAGATTGAAATATTAAGAAGGGAGACATGTAAGCTTGAGCTCCGTCTGCGTCCATACCATGGACATGACTTAGCCTCCATTCCTCCACACGAGCTCGAGGGGCTAGAGCAACAGCTCGAACATTCTGTCCGTAAAGTCCGTGAGCGTAAGCAACAGTTGGGGAATCTTAGCAGAAAGAAGCGGATGCTAGAAGACGATAACAACAATATGTACCGTTGGCTTCATGATGAGCATCGTACGGGGGTTGAGTTTCAGCAAGCTGGGATAGAGACCAAACCAATGGAGTATCAACAGTTTCTAGAGCAGGTTCAGTACTATAATGATCATCATCAGCAACAAAGCAGTGTTCTTCAGCTCCCTACGCTTCCTTCAGAGATTGATCTTAGTTACCATCTCCAGCTTGCTCAGCCTAATCTTCAAAACGATCCAACGACCAAGGTTGATTAA
Protein:  
MGRGKIEIKKIENKTSRQVTFSKRRNGLIKKTRELSVLCDAHIGLIVFSTTGKLTQYCSEHSNMPQLIDRYLTKEGLQLPDLNDDRDDLRHEIEILRRETCKLELRLRPYHGHDLASIPPHELEGLEQQLEHSVRKVRERKQQLGNLSRKKRMLEDDNNNMYRWLHDEHRTGVEFQQAGIETKPMEYQQFLEQVQYYNDHHQQQSSVLQLPTLPSEIDLSYHLQLAQPNLQNDPTTKVD